In the fast-paced world of e-commerce, managing your business finances can be both challenging and time-consuming. Fortunately, the best free Shopify accounting apps can help you streamline bookkeeping processes, ensuring accuracy and efficiency. These apps cater to various accounting needs, from tracking sales and taxes to generating reports and managing expenses. By integrating these top-rated tools into your Shopify store, you can save time and focus on growing your business. Whether you're a small startup or a growing enterprise, these apps offer essential features without breaking the bank. Dive into our curated list of the best Shopify accounting apps that are not only user-friendly but also free!

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Give & Grow Donations cover
Sure, here's a structured description for the "Give & Grow Donations" app, along with its standout features and advantages based on reviews:

The Give & Grow Donations app enables businesses to offer seamless donation options, supporting verified nonprofits worldwide. It enhances brand loyalty by incorporating various giving methods like round-up at checkout and product proceeds, all with precise donation tracking and reporting. The app ensures trust and safety for Shopify merchants, making giving effortless and transparent.

  • Verified Nonprofits: Connect with thousands of trusted nonprofits globally, ensuring your impact is reliable and meaningful.
  • Multiple Giving Methods: Offer diverse donation options such as round-up at checkout and portion of product proceeds, enhancing customer engagement.
  • Real-time Impact Calculator: Showcase your business's contribution with real-time data, encouraging more involvement from customers.
  • Automated Donation Processing and Tax Receipts: Save time with automatic tax documentation and streamlined donation handling.
  • Comprehensive Reporting: Access clear and transparent donation tracking and reporting in one centralized location.

According to user reviews, the app is praised for its easy integration and intuitive interface, making it simple for businesses to create a positive social impact. Users appreciate its robust features for enhancing customer loyalty and increasing average order values. The automatic processes for donation tracking and tax receipts are also highly valued, saving significant time and resources.

Dynamics 365 Business Central cover

Dynamics 365 Business Central is a comprehensive business management solution aimed at enhancing financial visibility, optimizing inventory management, and unlocking valuable business insights. It offers robust features to streamline operations across purchasing, manufacturing, and warehousing while providing advanced tools for financial analysis and decision-making.

  • Financial Visibility: Gain complete control over your profit, costs, tax calculations, and reporting to enhance financial governance.
  • Inventory Optimization: Ensure timely product delivery and flexibility in business models with clear visibility and control across all inventory and supply chain operations.
  • Business Insights: Utilize AI-driven insights to predict sales, automate product ordering, and manage costs efficiently, offering a proactive approach to business strategy.
  • Multi-Channel Support: Seamlessly support multiple Shopify shops, sales channels, and locations, simplifying the expansion of online businesses.
  • Bi-Directional Synchronization: Enjoy real-time synchronization of products, inventory levels, and customer data, ensuring consistency across systems.

Outstanding reviews of Dynamics 365 Business Central highlight its ability to significantly enhance operational efficiency and strategic decision-making. Users appreciate its seamless integration across multiple Shopify channels, intuitive interface, and powerful synchronization capabilities that make inventory management and customer data management remarkably easy. The system's AI-driven insights and automated processes are frequently praised for improving forecasting accuracy and reducing manual workload.

(1.5/5)
15 Reviews
Shopify Bill Pay cover

Shopify Bill Pay is a comprehensive business payments solution that allows users to easily schedule, pay, and manage all their business transactions from a single platform. It supports various payment methods and ensures vendors are paid through a preferred method regardless of their acceptance limitations.

  • Flexible Payment Methods: Pay your business bills using different methods such as Shopify Balance, debit/credit card, or ACH bank transfer.
  • Vendor Payment Assurance: Ensures vendors get paid via check or bank transfer even if they do not accept certain payment types.
  • Integration Capabilities: Sync with platforms like Gmail, Stocky, or QuickBooks Online for seamless account updating.
  • Efficient Payment Management: Set up batch and recurring payments to save time and streamline your billing cycles.
  • Dashboard Organization: Sort, filter, and schedule payments all from a centralized and dedicated dashboard.

The app's outstanding advantages include its user-friendly interface, which simplifies handling complex transactions, and the flexibility it offers in terms of payment options. Users consistently highlight the convenience and time-saving aspects, as well as the reliable customer support and seamless integration with other business tools, making it a preferred choice for managing payments.

2,302 Reviews
Data Export IO: Reports cover

Data Export IO: Reports is a powerful tool designed for Shopify store owners to automate reporting processes effectively. It offers a wide array of pre-made reports covering various essential aspects such as Sales, Taxes, Inventory, and more. With advanced customization and scheduling options, store owners can easily export data in multiple formats and organize it according to their needs. The app includes access to free expert assistance for seamless integration and troubleshooting.

  • Pre-made Reports: Access a diverse range of reports for Sales, Products, Payouts, POS, and more, significantly reducing the time to gather insights.
  • Advanced Filters: Add multiple conditions to precisely tailor reports to your needs, making data extraction more efficient.
  • Column Management: Customize reports by freezing, filtering, renaming, sorting, cloning, and hiding fields to meet specific business needs.
  • Export Friendly: Generate reports in user-friendly formats such as CSV, Excel, and PDF to streamline data handling and sharing.
  • Password Protected: Enhance security by adding password protection to restrict access to sensitive data within reports.

The outstanding advantages of the Data Export IO: Reports app, based on user reviews, include its comprehensive data export capabilities and exceptional customer support. Users appreciate the app's flexibility and customization options, allowing them to tailor reports to their specific requirements. Automated scheduling and integration with platforms like Google Drive save significant time, improving operational efficiency. Customer support consistently receives high praise for being responsive, knowledgeable, and dedicated to promptly resolving issues.

1,736 Reviews
Report Pundit: Custom Reports cover

Report Pundit is a comprehensive reporting tool tailored for Shopify store owners, allowing the creation of unlimited custom reports and leveraging prebuilt examples. It seamlessly integrates with multiple data sources, enabling users to generate detailed analyses across sales, tax, inventory, fulfillment, and more.

  • Free Report Service: Custom reports are created for you without extra charge, allowing users to focus on data analysis rather than report-building.
  • Export Options: Reports can be exported in Excel, CSV, or PDF formats, facilitating easy sharing and record-keeping.
  • Automated Reports: Schedule reports to generate automatically, saving time and ensuring regular data updates.
  • Data Integration: Links with over 30 apps across payment, shipping, and marketing sectors, providing a holistic view of business operations.
  • Multi-Store Support: Unified reporting for multiple Shopify stores, easing data consolidation and management.

The app's standout advantage, as highlighted by users, is its extraordinary customer service, providing prompt and efficient assistance in creating and customizing reports. This ensures that even users with little experience can produce complex, tailored reports with ease. Additionally, its user-friendly interface and comprehensive feature set make it an indispensable tool for data-driven decision-making in Shopify stores. The reliability and responsiveness of the support team further amplify its value, ensuring a superior experience for all users.

2,879 Reviews
QuickBooks Online Global cover

QuickBooks Online Global provides a seamless connection between Shopify and QuickBooks Online, enabling merchants selling outside the US to efficiently manage their accounting, track income and expenses, and automate data entry. The app ensures synchronization of inventory and accounting data, simplifying financial management for Shopify users globally.

  • Automated Invoicing: Easily automate the entry of invoices, customers, and products by connecting Shopify and QuickBooks Online.
  • Inventory Synchronization: Keep stock levels updated between QuickBooks Online (Plus or higher) and Shopify, ensuring accurate inventory management.
  • Data Import: Import sales data directly from Shopify to QuickBooks Online, reducing manual data entry and minimizing errors.
  • Comprehensive Tracking: Track income and expenses to maximize tax deductions and optimize your financial strategies.
  • Multi-Store Integration: Connect all Shopify storefronts to QuickBooks Online, providing a centralized platform for businesses operating internationally.

The app's outstanding advantages are emphasized by highly positive reviews, highlighting the efficiency and reliability of the support team, particularly in resolving synchronization issues swiftly. Users appreciate the reduction in data entry workload, seamless data flow, and the ability to focus more on running their business. The exceptional support and customer service provided by team members like Nick, Ben, and Sherwin make integrating the systems an easy and streamlined process.

Mipler — Advanced Reports cover

Mipler — Advanced Reports empowers Shopify store owners to effortlessly analyze their store's performance. This app helps create and visualize reports using various data points available such as metafields, tags, and other properties. Users can manage sales analytics, financial reports, tax reports, inventory reports, customer analysis, and more. It offers seamless integration with Google Sheets, and facilitates data merging from multiple stores into one report.

  • Comprehensive Data Analysis: Harnesses various data points like metafields and tags to create insightful reports.
  • Wide Range of Reports: Offers sales analytics, financial, tax, inventory, and customer analysis reports.
  • Multi-Store Reporting: Allows merging data from multiple Shopify stores into one cohesive report.
  • Seamless Integration: Compatible with Google Sheets and Shopify Plus, offering easy data exports and imports.
  • Custom Reporting Service: Offers free report customization services and public link sharing without requiring Shopify admin access.

Description of the app's outstanding advantages based on the app's reviews reveals exceptional customer support, notably from team members like Andrii and Sviatoslav, praised for their attentiveness and quick problem resolution. The app is lauded for its user-friendly interface, robust reporting features surpassing those of Shopify, and its capability to save significant time by automating reporting processes. The adaptability to specific business needs and efficient handling of metafields further enhance its value, making it a highly recommended choice for data management and analytics.

QuickBooks/Xero sync ‑ Synder cover

Synder is an essential app for Shopify merchants that automates syncing of sales, fees, taxes, and more with popular accounting platforms like Xero, Sage Intacct, and QuickBooks. It offers seamless reconciliation, multi-currency, and inventory syncing, significantly simplifying bookkeeping processes.

  • Auto-sync: Automatically synchronizes Shopify sales, fees, inventory, and taxes with QuickBooks, Intacct, or Xero, ensuring accuracy and reducing manual entry.
  • Flexible sync modes: Provides options to sync daily summarized entries or each transaction individually, allowing for tailored bookkeeping.
  • Historical imports: Facilitates importing years of historical transactions with duplicates protection, ensuring comprehensive financial records.
  • Multi-channel support: Automates sales across 25+ platforms, making it a versatile tool for multi-channel sellers.
  • Quick setup: Connects all sales channels in under 15 minutes, minimizing onboarding time and maximizing efficiency.

The app's outstanding advantages include excellent customer support and substantial time-savings in bookkeeping, as evidenced by user reviews praising its efficiency and support team's responsiveness.

194 Reviews
QuickBooks Bridge cover

QuickBooks Bridge is an app that seamlessly syncs sales data to QuickBooks Online, offering flexible options for individual order or summary sync, making data management easy and efficient.

  • Individual Order Sync: Export orders, products, and customer data automatically to QuickBooks, ensuring comprehensive records with every transaction.
  • Summary Invoice Sync: Conveniently create one entry per day for each payment method, simplifying reconciliation processes with daily summaries.
  • Automated Sync Process: Enjoy an efficient syncing experience with options for automatic or manual syncing at your convenience.
  • Easy Reconciliation: Streamline financial management with user-friendly reconciliation options within the app.
  • Comprehensive Tax Support: Includes built-in tax options, like HST, GST, and PST for Canada, providing flexibility for different regional requirements.

This app has received outstanding reviews for its immediate and clean syncing capabilities without data loss, excellent customization options for detailed data import, and superior efficiency compared to native options. Users commend the exceptional customer support team, noting their expertise, responsiveness, and professionalism, which have significantly simplified their workflows. QuickBooks Bridge offers high ease of use, especially across multiple stores, ensuring a top-tier integration experience.

131 Reviews
sevdesk Buchhaltung 2025+ cover

The sevDesk 2024 app is designed to streamline business operations by automating invoicing processes and financial management tasks, reducing manual workload with intelligent features and seamless integrations.

  • Order Synchronization: Effortlessly sync order data to ensure your records are always up to date without extra manual input.
  • Invoice Automation: Automatically create and send invoices, credit notes, and refunds, saving valuable time.
  • Multi-Account Management: Efficiently handle multiple accounts and shops, ensuring smooth operations across different platforms.
  • Dynamic Text Replacement: Customize invoices and refunds with dynamic text to cater to specific client needs effortlessly.
  • DATEV Export: Easily export receipts for DATEV, simplifying your accounting and bookkeeping processes.

According to user reviews, sevDesk 2024 is praised for its ease of use and seamless integration with existing workflows. Users highlight the app's significant time savings and effective automated invoice management, making it an indispensable tool for businesses looking to streamline their accounting processes.

93 Reviews
Profitario ‑ Profit Analytics cover

Profitario ‑ Profit Analytics is an app designed to streamline the process of reporting net profit, margins, disputes, and customer lifetime value by automatically importing data from various platforms like Shopify, AliExpress, Facebook Ads, and PayPal.

  • Seamless Integrations: Automatically imports data from platforms like Shopify, AliExpress, Facebook Ads, and PayPal.
  • Comprehensive Reporting: Generates detailed reports on net profit, margins, expenses, and lifetime value of customers.
  • Time Efficiency: Reduces the time spent on manual calculations, allowing users to understand their financial status quickly.
  • User-Friendly Interface: Provides an easy-to-use interface for monitoring essential business metrics in real-time.
  • Free Trial: Offers a 14-day free trial for stores of all sizes, allowing users to experience the app risk-free.

Profitario has been praised for its transformative effect on managing Shopify stores, providing comprehensive and real-time insights into business metrics. Users find it particularly valuable for its ability to simplify profit tracking and decision-making, with a simple interface and effective reporting features that reflect a deep understanding of a store's financial health. - User Rating: 5/5

49 Reviews
sevdesk Buchhaltung 2026+ cover

SevDesk Buchhaltung 2025 ist eine vielseitige App, die die Buchhaltung durch Automatisierung nahtlos mit Ihrem Online-Shop verbindet und verwaltet.

  • Automatische Rechnungserstellung: Die App erstellt automatisch Rechnungen und Gutschriften für Bestellungen und erleichtert damit die Buchhaltungsprozesse.
  • Übersichtliche Belegdarstellung: Eine benutzerfreundliche Ansicht hilft Ihnen, den Überblick über alle Bestellbelege zu behalten, indem sie klar und strukturiert dargestellt werden.
  • Flexible Konfigurationsmöglichkeiten: Zahlreiche Einstellungsmöglichkeiten sorgen für die rechtskonforme Erstellung und Verwaltung von Belegen.
  • Email-Versand und Link-Einbettung: Dokumente können direkt per E-Mail versendet oder Links in Benachrichtigungen eingebettet werden.
  • Produkt- und Kundensynchronisation: Unterstützt die Synchronisation von Produktinformationen und bietet Anpassungsmöglichkeiten für One-Stop-Shop- und Geschäftskunden.

Die herausragenden Vorteile der SevDesk Buchhaltung 2025 liegen in ihrer Zuverlässigkeit und Flexibilität, wie die erstklassigen Bewertungen bestätigen. Nutzer loben die nahtlose Integration mit Shopify, die exzellente Servicequalität und die benutzerfreundlichen Einstellungen, die selbst komplexe Einrichtungen intuitiv gestalten. Der kompetente Support sorgt für eine schnelle Behebung etwaiger Probleme, was die App besonders für jene attraktiv macht, die Buchhaltungsaufgaben automatisieren möchten.

62 Reviews
Merchbees Inventory Value cover

Merchbees Inventory Value is an efficient app that provides real-time stock value and inventory quantity across all products. It allows you to view up-to-date reports instantly, with capabilities to create unlimited presets, and generate historical inventory reports for comprehensive accounting needs.

  • Real-Time Reporting: Instantly access the most current inventory information without any delays.
  • Customizable Presets: Create and manage unlimited report presets tailored to specific locations, collections, or products.
  • Detailed Reports: Access both collection-based and product-specific inventory reports effortlessly.
  • Historical Snapshots: Conduct weekly or monthly snapshots to compile detailed historical inventory data for accounting purposes.
  • Data Export: Export comprehensive inventory data including quantity and value per variant to formats like Excel and PDF.

The app's outstanding advantages, as praised by users, include its ease of use and time-saving capabilities. Users appreciate the accurate and prompt updates on inventory values, the ability to customize reports extensively, and its immense utility in bookkeeping and financial tracking, all contributing to a highly efficient inventory management experience.

(1.8/5)
51 Reviews
QuickBooks Online cover

QuickBooks Online is designed to streamline your accounting processes by facilitating the integration between your Shopify store and QuickBooks. It effortlessly tracks payouts by breaking them into sales receipts, refund receipts, and expenses while pulling historical data for comprehensive insights.

  • Simple Integration: Connect your Shopify account with QuickBooks in just a few easy steps for seamless importing of payouts.
  • Automated Categorization: Automatically sorts payouts into sales, refunds, and fees, saving time on data entry and ensuring accuracy.
  • Comprehensive Reporting: Provides summarized sales, refund, and expense transactions which are easily viewable on your financial statements.
  • Cash Flow Insights: Helps you stay on top of your cash flow by better understanding your revenue channels and financial distribution.
  • Historical Data Access: Load up to 24 months of historical data from Shopify Payouts for better financial analysis and planning.

Users have praised QuickBooks Online for significantly reducing the time spent on manual bookkeeping tasks, enjoying its simplicity in integrating with Shopify, and appreciating its accurate transaction categorization. The app's ability to present clear cash flow insights and streamlined summary reports ensures users have a much clearer visibility of their business finances.

38 Reviews
QuickBooks Sync by MyWorks cover

QuickBooks Sync by MyWorks is a robust solution designed to simplify ecommerce accounting through seamless integration with QuickBooks Online and Shopify. It ensures effortless, two-way data synchronization, covering orders, customers, payments, and inventory. The app is crafted to automate accounting, align with business workflows, and offers customizable features for enhanced user experience.

  • Seamless Data Sync: Automatically sync orders, payments, and inventory between Shopify and QuickBooks for accurate record-keeping.
  • Automated Accounting: Reduces manual entry with automated processes that fit your business workflow.
  • Advanced Customization: Features like automapping and custom field mapping allow tailored integrations.
  • User-Friendly Interface: Quick setup and easy navigation make it accessible for all users.
  • Reliable Customer Support: Enjoy peace of mind with 24/7 support ready to assist whenever needed.

The app's outstanding advantages, as highlighted by users, include exceptional customer support and responsiveness, which makes the company highly recommended. Users appreciate the seamless integration and efficiency it brings to their QuickBooks and Shopify operations, emphasizing the tool's effectiveness in handling B2B sales and reducing duplicate invoicing. These features not only streamline workflows but also significantly enhance productivity with minimal fuss.

31 Reviews
Fakturoid | Integration cover

Fakturoid | Integration seamlessly connects your Shopify store with Fakturoid, providing efficient invoice management and robust customer support.

  • Seamless Shopify Integration: Integrates effortlessly with Shopify, enabling smooth synchronization of invoice data and transactions.
  • Responsive Customer Support: Offers rapid and accommodating support ready to tackle any issues, ensuring a stress-free experience.
  • Customizable Invoice Setup: Facilitates user-specific changes to invoice setups, enhancing personalization and efficiency.
  • Reliability Across Multiple Stores: Proven track record of reliable performance across multiple stores over several years.

The app is highly praised for its seamless integration with Shopify and its exceptional customer support. Users appreciate the app's ability to handle multiple stores reliably and its flexible invoice customization options, making it an outstanding tool for business operations.

10 Reviews
SuperFaktúra | Integration cover

Install the SuperFaktúra | Integration app to seamlessly link your SuperFaktúra account with automated document creation based on order statuses. Easily customize document contents and triggers from the dashboard, while supporting sales in various currencies and languages. Benefit from daily human support for a smooth invoicing process.

  • Automated Document Creation: Automatically generate documents triggered by your order statuses, streamlining your workflow.
  • Customizable Content: Easily configure language, unit, and variable symbols to tailor documents to your needs.
  • Multi-Currency and Multi-Language Support: Effortlessly handle sales in different currencies and languages for global business operations.
  • Comprehensive Support: Access daily human support to resolve queries and ensure uninterrupted service.
  • Automatic Status Syncing: Sync paid status with minimal effort to maintain accurate financial records.

The app's outstanding advantages, as highlighted in user reviews, include its intuitive interface that facilitates quick invoicing, client management, and payment tracking. Automated billing features save time, while built-in analytics enhance cash flow and performance monitoring. Users have praised the app for its reliable performance and excellent support, making it a top choice for a user-friendly invoicing solution.

8 Reviews
Regulo : Factures et Compta cover

Regulo : Factures et Compta simplifie la gestion de la facturation pour les entreprises, en offrant des fonctionnalités automatisées pour générer des factures et des avoirs avec une TVA vérifiée. Compatible avec les administrations Française et Européenne, il permet également l'export de fichiers comptables (FEC) intégrables sans effort.

  • Génération automatisée: Créez des factures et des avoirs instantanément avec vérification de la TVA.
  • Conformité fiscale: Assurez une gestion comptable en conformité avec les exigences françaises et européennes.
  • FEC Export: Exporte les fichiers comptables (FEC) pour une intégration rapide et sans erreur.
  • Personnalisation: Adaptez les factures à votre image grâce à l'ajout de logos et de couleurs personnalisées.
  • Synchronisation Shopify: Intégration fluide pour les utilisateurs de Shopify, facilitant l’envoi de factures normées.

Les utilisateurs louent Regulo pour sa simplicité d'utilisation et son efficacité dans la gestion comptable, notamment pour les e-commerces utilisant Shopify. L'application est reconnue pour sa capacité à produire des factures personnalisées conformes, ainsi qu'à fournir des exports comptables complets, ce qui se traduit par un gain de temps significatif. Les équipes de support sont également appréciées pour leur réactivité et service impeccable.

By Green Duck

  • $9-$29 / Month
16 Reviews
Import2Tally cover

Import2Tally is an efficient tool designed for business owners and accountants, enabling them to perform batch imports of financial data such as sales, credit notes, settlement receipts, and commission expenses into Tally ERP9 with accuracy and speed.

  • High-speed Data Transfer: Capable of transferring 500 vouchers per minute, significantly speeding up the data import process.
  • Comprehensive Data Import: Supports importing nearly 42 data points, ensuring complete and accurate financial records.
  • Enhanced Tax Preparation: Facilitates quick reconciliation and tax filing by providing timely and accurate data consolidation.
  • Detailed Profit Margin Analysis: Allows users to minutely check each transaction and SKU profit margin, aiding in profitability assessment.

According to reviews, Import2Tally is praised for drastically reducing the time spent on reconciliations and improving data transparency, allowing users to focus more on their core business activities. Users commend the app for its reliability and precision in handling financial transactions, making it a highly recommended tool for efficient financial management.

14 Reviews
Taxomate QuickBooks Xero Sync cover

Taxomate QuickBooks Xero Sync automatically processes Shopify payouts and posts journal entries to QuickBooks Online or Xero. It simplifies financial management by detecting transactions, summarizing revenue and expenses, and allowing customization of accounts and tax rates.

  • Automated Integration: Taxomate automatically fetches and processes Shopify payouts, streamlining your workflow.
  • Accounting Summary: Generates a consolidated summary of revenue, expenses, and transactions for easier financial tracking.
  • Customizable Accounts: Allows selection of specific accounts and tax rates for personalized financial management.
  • Expense Tracking: Simplifies the matching of invoices to bank account payments for improved clarity.
  • Comprehensive Reports: Provides detailed insights into Cost of Goods Sold and Inventory Valuation.

The app is highly praised for its user-friendliness and ability to automate accounting tasks, significantly reducing errors and saving time. Users appreciate its seamless integration with QuickBooks and Xero, making it an essential tool for simplifying data entry and improving bookkeeping accuracy for Shopify store owners.

Choosing the right accounting tools is crucial for maintaining financial health and operational efficiency in your e-commerce business. Our list highlights the top free Shopify accounting apps that can transform how you manage finance and bookkeeping. By leveraging these apps, you ensure compliance with financial regulations while also gaining valuable insights into your business performance. Remember, the ideal accounting app should integrate seamlessly with your existing systems and offer all necessary features without compromising on quality or performance. Explore these top options to find the perfect match for your Shopify store.

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