Shopify Payment fees apps 2025

Xero Integrator by CarryTheOne

$36.99 / Month

9.1

29 Reviews

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Save time by automating your accounting

Credit notes

Pos integration

Import orders

Product sync

Customer import

Automate accounting

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XERO SYNC Orders and Inventory

$19.99-$59.99 / Month

(2.7/5)

214 Reviews

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Easiest & automated XERO sync & export for reconciliation Show more

XERO SYNC by BOLD is an essential tool for Shopify users seeking seamless integration with Xero, making bookkeeping a breeze. This app ensures that all your Shopify orders are effortlessly synced to Xero, including line items, shipping, and taxes, providing a comprehensive view of your sales data. If you're using Shopify Payments, you'll appreciate the automatic recording of refunds, discounts, and payment fees as separate entries, enhancing financial clarity. With options for scheduled syncing or on-demand access, your data is always at your fingertips, supporting real-time financial decision-making. XERO SYNC also allows for the importation of customer details with each order, streamlining customer data management. The app’s global tax support and ability to sync sales, products, shipping, and more to Xero simplifies tax compliance across borders. Backed by a dedicated support team and extensive documentation, users can confidently integrate and manage their Shopify and Xero accounts.

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Refund processing

Automated syncing

Customer import

Shipping sync

Order line item inclusion

Tax integration

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KashFlow Connector by CTO

$36.99 / Month

8.2

3 Reviews

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Seamlessly import sales, refunds, customers, payments & fees Show more

KashFlow Connector by CTO is a robust app designed to seamlessly connect multiple Shopify stores to a single KashFlow organization, making it ideal for businesses with expanding operations. As the original and longest-running Shopify-KashFlow integration, it provides a reliable and time-tested solution for managing sales transactions. The app offers comprehensive tax support across various regions, including US and Canada Sales Tax, Australian & New Zealand GST, and UK & European VAT, ensuring accurate and compliant tax handling. Businesses will appreciate the streamlined processes for importing orders, POS sales, payments, and payment fees into KashFlow invoices, as well as handling refunds and returns through credit notes. This integration is particularly beneficial as sales volumes increase, providing a more efficient and organized accounting workflow. Overall, KashFlow Connector by CTO simplifies the financial management of multiple stores while maintaining meticulous attention to tax requirements.

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Import orders

Handle refunds

Manage customers

Sync payments

Payment fees integration

Multistore support

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QuickBooks Link by CarryTheOne

$36.99 / Month

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Connect multiple Shopify stores to QuickBooks with comprehensive tax support. Show more

QuickBooks Link by CarryTheOne is a powerful integration tool designed to connect multiple Shopify stores to a single QuickBooks company, making it ideal for businesses with expansive operations. This app ensures seamless tax compliance, offering comprehensive support for US and Canada Sales Tax, Australian and New Zealand GST, UK and European VAT, and more. It facilitates comprehensive streamlining by importing not just orders, refunds, and payments, but also payment transaction fees, customers, and items, ensuring a holistic view of your financial data. The app effectively prevents duplication by matching existing customers and items in QuickBooks, thereby maintaining clean and accurate records. It also allows the importation of orders, POS sales, and sales from various channels as QuickBooks invoices, enhancing efficiency. Additionally, the app supports multi-currency operations, and it is compatible with QuickBooks Tax Automation for US businesses, making it an indispensable tool for your accounting needs.

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Multi-currency support

Multi-store integration

Comprehensive tax support

Prevent duplication

Import payment fees

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かんたんfreee会計データ連携

$14-$99 / Month

(2.9/5)

5 Reviews

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発生した注文を自動/手動でfreee会計に連携！決済手数料や送料などを商品とは別の勘定科目に指定することもできます Show more

かんたんfreee会計データ連携は、Shopifyで毎日発生する注文データを、自動でfreee会計に連携するアプリです。このアプリを活用することで、勘定科目や取引先、メモタグ、部門、品目の指定ができ、より詳細な記帳が可能です。注文に含まれる決済手数料、送料、消費税、割引を別々の勘定科目に振り分けることができるため、きめ細かな会計管理が可能です。また、未決済取引の消込をスムーズに行うこともサポートしています。さらに、Shopifyの商品在庫を棚卸として記帳するための機能も備わっており、一度削除したデータも再連携が容易に行えます。自動連携の設定により、毎日手間なくfreee会計とのデータ連携が実現でき、過去の注文も手動で連携可能です。ユーザーのニーズに応じて、詳細な設定や機能追加の相談も承っております。

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Inventory management

Tax handling

Automatic data synchronization

Manual data synchronization

Account code assignment

Payment fee recording

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PROFITX | CALCULATOR

$1 / Month

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Quickly calculate product profits, including fees and bundles, with ease. Show more

PROFITX | CALCULATOR is a user-friendly application designed to streamline profit calculations for individual products and bundles. It's tailored to include essential fields that cover various sales transaction expenses such as Advertising Fees, Transaction Fees, and Payment Fees, ensuring a comprehensive profit analysis. Users can easily import products by reference, making data entry swift and efficient, while direct edit links allow for seamless modifications. The app features an integrated search function, enabling quick access and adjustments to product listings. With its intuitive interface, PROFITX | CALCULATOR simplifies the complex calculations involved in assessing total product and bundle profits. Whether you're managing a small business or a large inventory, this app provides a reliable tool for precise profit management.

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Quick profit calculations

Bundle profit calculations

Import products easily

Reference product listings

Direct edit links

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UpCharge Fees Addons Surcharge

$9.99 / Month

8.5

155 Reviews

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Surcharges and order fees to increase your sales and AOV Show more

UpCharge: Surcharges & Fees is a versatile app designed to streamline the addition and management of fees within your shopping platform. It allows you to create an unlimited number of fees or surcharges, which can be applied either to specific products or the entire shopping cart. Users have the flexibility of designing fixed-amount fees or percentage-based fees, ensuring customization to suit different pricing strategies. The app also empowers users with the ability to set conditions that determine the visibility and applicability of these fees, providing clarity and control over fee implementation. Whether you're charging for rush delivery, special handling, insurance, gift wrapping, or any custom requests, UpCharge accommodates a wide array of fee types. The app supports diverse input methods, such as checkboxes, drop-downs, radio buttons, text entries, and more, enhancing user interaction and experience. This feature-rich tool is ideal for businesses seeking to optimize their pricing models through strategic surcharges.

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Conditional visibility

Unlimited fees

Attach to products

Percentage-based fees

Fixed-amount fees

Fee input types

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Canteen ‑ Deposits and Fees

$9.99 / Month

9

51 Reviews

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Charge mandatory fees for deposits, recycling or setup fees Show more

The Canteen app is an essential tool for merchants seeking a streamlined solution to effortlessly collect various business fees. Designed with convenience in mind, Canteen simplifies the collection of bottle deposits, environmental fees, setup fees, design fees, core charges, security deposits, and more. Featuring a versatile rule builder, users can easily create and customize fee rules, update thumbnails, adjust tax options, and define the frequency of fees—whether one-time, per cart, or per product quantity. The app seamlessly integrates fees into the cart and checkout process, supporting both ecommerce and POS systems. Additionally, merchants can generate detailed reports on collected fees to aid in accounting and financial management. Canteen is compatible with hundreds of Shopify themes, including 2.0 themes, ensuring broad usability across different platforms.

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Collects mandatory fees

Rule builder configuration

Automatic fee addition

Flexible fee settings

E-commerce and pos integration

Fee reporting for accounting

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Chargly ‑ Collect POS Fees

$5.99 / Month

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Effortlessly collect POS fees with Chargly for seamless transactions. Show more

Chargly - Collect POS Fees is a convenient app designed to help businesses maintain their revenue by seamlessly integrating fee collection into their point of sale systems. With Chargly, POS staff can effortlessly apply credit card fees, surcharges, and setup fees simply by tapping the Chargly tile during the checkout process. This ensures that all applicable fees are added to the customer's final bill, minimizing revenue loss. The app's user-friendly interface ensures a smooth experience for both employees and customers. Additionally, Chargly provides easy reporting of collected fees, aiding businesses in maintaining accurate financial records and simplifying accounting. Chargly is the perfect solution for businesses looking to streamline fee collection and maximize revenue.

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Seamless transactions

Collect pos fees

Easy fee addition

Pos fee reporting

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HoneyFee

$9.99 / Month

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Offset transaction costs with customizable fees for diverse payment methods. Show more

HoneyFee is a versatile tool designed to help merchants offset transaction costs by implementing customizable fees based on various payment methods. It caters to businesses of all sizes, offering a seamless way to recover costs through flexible rules, such as percentage-based or fixed fees that adjust according to cart values. By integrating smoothly with the checkout process, HoneyFee enables merchants to regain control over payment provider expenses, promoting profitability without compromising the customer experience. The app allows for effortless configuration and management of fees, ensuring they suit individual business needs. With a simple dashboard, users can easily track recovered transaction fees, providing clear insights into cost savings. Tailored for Shopify Plus customers, HoneyFee enhances the checkout process to ensure a smooth, user-friendly experience.

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Checkout integration

Dynamic payment options

Flexible rules

Customizable fees

Fee tracking dashboard

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Order Handling Fees

$10-$100 / Month

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Only app that supports taxable variable fees for POS (eg PIF) Show more

Order Handling Fees is a specialized app designed exclusively for POS systems, aimed at capturing additional fees like the Public Improvement Fee (PIF) that are levied by local governments. These fees, often applicable to point-of-sale transactions, can be easily configured as either fixed amounts or as a percentage of the total cart value. Once installed, users can add an intuitive tile to their POS handheld devices, facilitating quick access to these fee settings. Upon adding items to a cart, a simple press of the tile displays and applies the configured fees, seamlessly integrating them into the order total. Additionally, the app allows for the categorization of fees as taxable or non-taxable, providing flexibility for various jurisdictions. Users can also customize their reporting by naming or assigning SKUs to the fees being collected, ensuring comprehensive downstream financial tracking and compliance.

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Configurable fees

Taxable options

Pos tile integration

Fixed/variable fees

Custom fee naming

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FlexiFees ‑ Conditional Fees

$3 / Month

8.2

1 Reviews

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Enhance your cart with flexible, automated fee management. Show more

FlexiFees ‑ Conditional Fees is a dynamic app designed to streamline the addition of extra mandatory fees to your online store's checkout process. It allows you to seamlessly attach fixed-amount or percentage-based fees to specific products or the entire shopping cart, ensuring every necessary charge is applied effortlessly. With customizable conditions, you gain full control over when and how these fees are applied, tailoring the experience to suit your business needs. The app operates smoothly in the background, utilizing webhooks to detect changes and automatically update the storefront cart when conditions are met. This ensures a seamless shopping experience for your customers, with fees being adjusted in real-time as products are added or changed. FlexiFees is the perfect solution for online businesses looking to manage additional fees with precision and ease.

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Product extra fees

Cart fees

Conditional fee applicability

Webhook fee addition

Automatic cart update

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Order Fees by oBundle

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"Customize order fees with precision; flexible rules for diverse needs." Show more

Order Fees by oBundle is an innovative app designed to provide businesses with precision and flexibility in managing order fees. This app allows you to create dynamic fee rules by combining multiple conditions, such as targeting specific customer groups, product categories, shipping methods, or payment methods. With a range of flexible fee types, businesses can tailor their fee structures to match their unique needs, making it ideal for companies operating across multiple sales channels or regions. The seamless integration with BigCommerce B2B Edition enables the creation of invoice late fees, enhancing functionality for B2B transactions. The app features a clean and intuitive interface built on BigCommerce's native design system, ensuring a consistent and smooth experience for store administrators. Real-time fee calculations during checkout offer transparency, assuring customers know exactly what fees apply to their orders.

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Single interface management

Dynamic fee rules

Flexible fee types

Real-time fee processing

B2b integration

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FeeBee ‑ Fees and Deposits

$9.99 / Month

9.1

7 Reviews

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Füge Pfand, Gebühren und Zusatzkosten zu Produkten hinzu Show more

FeeBee - Gebühren und Pfand is a versatile app designed to streamline the addition of various product fees, such as deposits, taxes, flat rates, or additional insurances, directly to your products with just a few clicks. This app ensures that all fees are clearly itemized at checkout and within the order details, maintaining compliance with legal requirements. Thanks to Shopify Bundles, it prevents any possibilities for fees to be bypassed by customers. The app is compatible with all Shopify themes without the need for any custom adjustments, offering seamless integration. FeeBee also includes a dedicated German-speaking support team, ready to assist and ensure that you can efficiently set up and launch the app in just minutes. Moreover, it automatically displays fees on product pages, in the shopping cart, and during checkout, providing transparency for customers at every stage of their purchase.

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Checkout integration

Automatische gebühren

Pfand hinzufügen

Gebühren aufschlüsseln

Produktseiten gebühren

Alle themes unterstützt

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Magical Fees & Tariffs

$9.99-$19.99 / Month

9.2

59 Reviews

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Add Required Fees to Products - Collect Surcharges & Deposits Show more

Magical Product Fees is a versatile app designed to simplify the process of adding and managing various types of fees to your products or entire orders. Whether you're running an online store or a physical retail space through POS, this app allows you to efficiently apply fees such as deposits, surcharges, service charges, eco fees, and more. With a user-friendly fee builder, you can create both fixed price and percentage-based fees, tailored to your business needs. The app comes equipped with flexible rules that give you control over when and how these fees are applied, ensuring a seamless integration into your sales process. Additionally, the app displays fees transparently on product pages, carts, and during checkout, enhancing customer interaction. Supported by a responsive customer service team, you can have the app up and running in just minutes, making fee management effortless and straightforward.

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Add required fees

Customize fee rules

Apply percentage fees

Attach fixed fees

Display on checkout

Install App

Rubix Advanced COD Fee

8.2

1 Reviews

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Hide payment, rename payment, & reorder payment without coding Show more

SupaCheckout Hide Payment is a powerful app designed to give you complete control over your online store's checkout page by allowing you to hide, rename, and reorder payment methods. This flexibility enables you to tailor the payment experience according to your specific business needs and customer preferences. With customizable payment rules, you can fine-tune the payment process based on factors like cart total, subtotal, and currency, ensuring a seamless shopping experience. The app is also instrumental in reducing unwanted chargebacks and enhancing your store's checkout flow, ultimately improving your conversion rates. SupaCheckout is designed for ease of use, featuring a testing mode that lets you apply customizations risk-free. Best of all, it operates without compromising your website's speed performance, offering you enhancements at lightning-fast speeds.

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Hide payment methods

Rename payment methods

Reorder payment methods

Create payment rules

Testing mode

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Payment Groups

7.1

4 Reviews

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Customize payment options for B2B/B2C clients, reduce processing fees. Show more

PaymentGroups is a versatile app designed to give store owners advanced control over their payment method displays. It allows you to customize and segment payment options based on customer types, making it ideal for businesses catering to both wholesale and retail clients. For instance, you can offer "Bank Deposit" and "Cash on Delivery" to your wholesale customers while providing "PayPal" and "Braintree" for retail customers. This targeted approach not only enhances customer satisfaction but also helps businesses reduce costs by minimizing processing fees associated with certain payment methods. With a focus on optimizing financial transactions and customer experience, the app is particularly beneficial for stores managing B2C and B2B clients. Start your free trial today and discover how PaymentGroups can streamline your payment processes and save you money.

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Customize payment options

Segment customer groups

Show different payment methods

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FreshBooks Link by CarryTheOne

$36.99 / Month

(3/5)

3 Reviews

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Seamlessly import sales, customers, payments & fees Show more

FreshBooks Link by CarryTheOne provides a seamless integration solution for Shopify users, enabling the connection of multiple stores to a single FreshBooks account. This robust connector has stood the test of time as the original and longest-running integration between Shopify and FreshBooks. It is designed with a particular focus on correct tax handling, offering comprehensive tax support across different regions, including US and Canada Sales Tax, Australian and New Zealand GST, and UK and European VAT. As businesses scale and sales volumes increase, users will appreciate the streamlined processes that this app enables. The integration allows the import of orders, POS sales, and sales from other channels as FreshBooks invoices, ensuring efficient financial management. Additionally, customers are matched or created automatically, and payments along with payment fees are imported, simplifying financial tracking and reporting.

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Import orders

Import payments

Pos sales

Match customers

Create customers

Payment fees

Install App

KashFlow Connector by CTO

$36.99 / Month

8.2

3 Reviews

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Seamlessly import sales, refunds, customers, payments & fees Show more

KashFlow Connector by CTO is a robust app designed to seamlessly connect multiple Shopify stores to a single KashFlow organization, making it ideal for businesses with expanding operations. As the original and longest-running Shopify-KashFlow integration, it provides a reliable and time-tested solution for managing sales transactions. The app offers comprehensive tax support across various regions, including US and Canada Sales Tax, Australian & New Zealand GST, and UK & European VAT, ensuring accurate and compliant tax handling. Businesses will appreciate the streamlined processes for importing orders, POS sales, payments, and payment fees into KashFlow invoices, as well as handling refunds and returns through credit notes. This integration is particularly beneficial as sales volumes increase, providing a more efficient and organized accounting workflow. Overall, KashFlow Connector by CTO simplifies the financial management of multiple stores while maintaining meticulous attention to tax requirements.

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Import orders

Handle refunds

Manage customers

Sync payments

Payment fees integration

Multistore support

Install App

Payfy: Hide Payment Rules

$3.99-$9.99 / Month

7.3

128 Reviews

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Checkout customize to reorder, rename & hide payment methods. Show more

Payfy: Payment Rules is a versatile app designed to streamline the checkout experience by allowing merchants to hide, sort, or rename payment methods based on various conditions. With Payfy, you can conditionally disable certain payment options by country, discount levels, product types, and other cart attributes to better manage transactions. This feature helps prevent problematic orders, such as hiding PayPal for specific products like CBD, or restricting COD to addresses containing P.O. boxes. The app employs native Shopify functions API, ensuring seamless integration without the need for any additional Shopify Plus subscriptions. Merchants can also reorder payment methods to highlight preferred options and minimize unwanted transaction fees. Additionally, Payfy allows customization of payment options by criteria such as customer type, shipping method, or app-specific discounts, enabling a tailored checkout process that meets unique business needs.

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Customize checkout

Conditional visibility

Multi-condition application

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Shopify Payment fees apps

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Showing 1 to 20 of 6 Apps

Xero Integrator by CarryTheOne

XERO SYNC Orders and Inventory

KashFlow Connector by CTO

QuickBooks Link by CarryTheOne

かんたんfreee会計データ連携

PROFITX | CALCULATOR

UpCharge Fees Addons Surcharge

Canteen ‑ Deposits and Fees

Chargly ‑ Collect POS Fees

HoneyFee

Order Handling Fees

FlexiFees ‑ Conditional Fees

Order Fees by oBundle

FeeBee ‑ Fees and Deposits

Magical Fees & Tariffs

Rubix Advanced COD Fee

Payment Groups

FreshBooks Link by CarryTheOne

KashFlow Connector by CTO

Payfy: Hide Payment Rules