Shopify Invoice reconciliation apps 2025

NetWise: Wholesale & B2B

9.1

11 Reviews

Streamline accounts receivable and get paid faster. Show more

Netwise is an innovative B2B management platform designed to enhance financial operations for businesses, particularly those using Shopify B2B. With Netwise, businesses can accelerate their payment processes by automating invoice reconciliation and sending timely reminders to customers through its Automated Dunning feature. The app also offers comprehensive credit management, allowing businesses to set credit limits and efficiently manage customer accounts. It tracks customer payment history and generates detailed aging reports, facilitating strategic decision-making and improving cash flow. Additionally, users can create customized invoices that reflect their brand identity, ensuring consistency and professionalism in client communications. Overall, Netwise streamlines accounts receivable management, making it an essential tool for businesses aiming for smoother, more efficient financial transactions.

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Automated reminders

Custom invoices

Automates invoice reconciliation

Credit management

Tracks payment history

Aging reports

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Cointab Reconciliation System

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Automated Reconciliation System Show more

The Cointab Reconciliation System is a robust application designed to streamline the reconciliation of transactions for Shopify websites. Its comprehensive features allow users to efficiently reconcile orders from Shopify with Order Management System (OMS) reports, ensuring seamless integration and accuracy. The app also bridges the gap between Shopify/OMS orders and Payment Gateway (PG) and Cash on Delivery (COD) remittance reports, providing a unified view of all financial transactions. Users can verify PG charges based on different payment modes such as UPI, Net Banking, Debit Card, and Credit Card, ensuring precise accounting and oversight. Additionally, the application facilitates the verification of courier charges, considering factors like weight, volume, and zip code, which aids in precise logistics cost management. Moreover, it ensures the consolidated net credits from PG/COD partners are accurately reflected in the bank account statements, further enhancing financial transparency. By automating and simplifying these complex reconciliation processes, the Cointab Reconciliation System provides Shopify users with enhanced efficiency and control over their transaction management.

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Reconcile shopify orders

Sync oms reports

Match pg reports

Verify pg charges

Check courier costs

Verify cod remittance

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Finance Connect

$5-$40 / Month

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Simplify financial reconciliation with accurate data Show more

Finance Connect is your go-to app for streamlining financial transaction management with ease and efficiency. Designed to seamlessly integrate with your operations, it allows you to send and receive detailed order and refund information via a robust API. This feature-rich app lets you effortlessly resend individual or multiple transactions within a specified date range, facilitating organized reporting and reconciliation. By simply providing API credentials and endpoints, you can automate the delivery of transaction data, making it readily consumable for accounting and auditing purposes. Whether you’re handling complex order data or simple refunds, Finance Connect enhances your financial workflows with precision. Experience the convenience of managing your financial transactions more effectively with Finance Connect.

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Api integration

Send transactions

Receive transactions

Resend transactions

Detailed transactions

Date range filtering

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Dashi MYOB Accounting Sync

$29-$299 / Month

9.1

6 Reviews

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Automate bookkeeping and reconciliation with MYOB Accounting Show more

Dashi MYOB Accounting Sync is a powerful tool designed to automate the synchronization of Shopify data with MYOB accounting systems, including AccountRight and Essential. This app significantly reduces the time and effort spent on manual data entry by offering a comprehensive configuration that syncs transactions, such as sales, COGS, refunds, fees, gift cards, taxes, and payments across different gateways, directly to the relevant accounts. Additionally, Dashi ensures seamless synchronization of products, customers, and inventory, with updates pushed on an hourly basis to maintain real-time accuracy. Users can easily reconcile every transaction into either individual or summarized invoices, thanks to the app's flexible configuration options. Dashi also allows for comprehensive syncing of historical data, ensuring all past records are accurately reflected in MYOB. With a straightforward setup process that takes just three minutes and robust support, getting started and staying organized is effortless.

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Quick setup

Inventory synchronization

Flexible configuration

Transaction reconciliation

Automatic data sync

Historical data sync

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Amaka

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Amaka: Automate financial data sync and enhance bank reconciliation efficiency. Show more

Amaka is a powerful integration tool designed to streamline your financial processes by eliminating manual data entry and speeding up bank reconciliations. It seamlessly syncs daily order summaries from BigCommerce directly into your chosen accounting platforms, including Xero, QuickBooks Online, and MYOB. This integration ensures that your financial data is always up-to-date, allowing for accurate and efficient bookkeeping. With Amaka, you can customize your sales summary invoices by selecting from a variety of formats, tailored to suit your business needs. The app not only enhances the accuracy and reliability of your financial records but also saves you time, enabling you to focus on growing your business instead of managing data entry tasks. Whether you're a small business owner or a financial professional, Amaka offers a convenient and effective solution for managing e-commerce financials.

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Automated data sync

Invoice generation

Bank reconciliation

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Mantis

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AI administrative agent for reconciliation processes using PDFs, spreadsheets, emails and images. Show more

Mantis is a powerful application designed to streamline the handling of administrative documents, regardless of format. By performing validations, calculations, and data extraction, it efficiently organizes unstructured data, making tasks like reconciliation, collection, balancing, and procurement a breeze. The app offers a significant reduction in operational costs, saving users over 60%, while almost completely eliminating human errors with a 90% reduction. Moreover, Mantis enhances productivity with its rapid processing capabilities, executing tasks 20 times faster than traditional methods. Ideal for businesses seeking efficiency and accuracy, Mantis revolutionizes the way administrative processes are managed. With its advanced technology, Mantis empowers organizations to focus more on strategic initiatives rather than being bogged down by tedious document handling.

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Task automation

Error reduction

Data extraction

Document processing

Cost saving

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Order Printer ‑ Pdf Invoice EG

8

117 Reviews

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PDF Invoice Order Printer & Invoice Generator Show more

Order Printer ‑ Pdf Invoice EG, also known as Invoice Eagle, revolutionizes the invoicing process with a powerful and user-friendly interface designed to simplify how you create and manage invoices. The app offers automated calculations, which save time and minimize errors, ensuring accuracy and efficiency in your financial management. With its centralized platform, you can effortlessly print, manage, and organize all your invoices, making it an indispensable tool for businesses seeking streamlined operations. Invoice Eagle also includes features like automated tax calculations, making tax time easier and more manageable. Setup is a breeze, meaning you can start improving your invoicing system right away. Experience a new level of ease and efficiency in invoicing with Order Printer ‑ Pdf Invoice EG.

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Easy setup

Automated calculations

Print invoices

Manage invoices

Organize invoices

One-click printing

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GST Invoice Generator: Refrens

7.3

5 Reviews

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Refrens manages your automated branded invoices, packing slips Show more

GST Invoice Generator: Refrens is a robust Shopify app designed to streamline tax invoicing for your online store. This app allows you to create fully customizable and professional GST invoices tailored to your business needs and local regulations, including features like GST E-invoicing, E-way Bills, and ZATCA compliance. With additional capabilities such as 1-click WhatsApp sharing, automated tax, and accounting reports, and multi-currency support, managing your business transactions becomes seamless. The app also offers real-time creation and dispatch of tax invoices and refunds, ensuring a swift and efficient process. Monitor the status of your invoices by tracking if they've been viewed by clients, and keep comprehensive records of all transactions—whether paid, unpaid, or partially paid. Customize various elements like currency, language, tax rates, and invoice design to better suit the specific requirements of your business. For any inquiries or support, the Refrens team is reachable at +91 9104043036 or via email at [email protected].

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Customizable settings

Multi-currency support

Automated accounting

Customizable invoices

Payment tracking

Refund management

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F: PDF Invoice Generator

$21-$99 / Month

7.6

100 Reviews

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Print Order, Email Invoices App, Custom Invoice, Packing slip Show more

F: PDF Invoice ‑ Order Printer is a versatile app designed to streamline your invoicing process by automatically generating and sending PDF invoices to your customers as soon as an order is placed. With a user-friendly interface, it allows you to customize invoice templates without any coding, making it easy to create branded invoices on the go. The app supports a wide range of document types, including packing slips, credit notes, and refund forms, ensuring comprehensive coverage of your business needs. It guarantees that all invoices are beautiful and legally compliant, helping you avoid tax penalties, especially for global sales. To cater to an international clientele, the app offers multilingual translation options for invoices, covering languages like German, Italian, French, and Spanish. Additionally, it provides an opportunity to enhance your business communications by embedding PDF links in emails, enabling automatic dispatch to your customers. Take advantage of the app's New Year discount by subscribing to the pro plan before December 31st, 2023, to enjoy unlimited PDF invoices, download receipts, and print orders.

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Branded invoices

Credit notes

Print invoices

Customize templates

Email invoices

Translate invoices

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Taiwan Invoice

$1.99-$60 / Month

7.7

7 Reviews

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The invoice app designed for Taiwanese businesses Show more

Taiwan Invoice is designed to streamline the invoicing process for Shopify merchants in Taiwan, saving them valuable time and effort. By enabling direct invoice creation from the Shopify dashboard, the app eliminates the tedious tasks of exporting orders, reformatting them, and uploading to the invoice system. Its seamless integration with major Taiwanese invoice providers ensures compatibility and ease of use. The app also reduces the risk of human errors by programmatically mapping Shopify orders to invoices. This allows merchants to concentrate more on their products and business growth, by minimizing routine paperwork. If you're a Shopify seller operating in Taiwan, Taiwan Invoice is a highly recommended tool to simplify your invoicing tasks.

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Error prevention

Direct integration

Create invoices

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GST Suite

(1/5)

1 Reviews

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Download Invoice GST and create instant invoice while managing Show more

GST Suite is a comprehensive app designed to effortlessly generate advanced and error-free GST invoices, including IGST, SGST, and CGST, for your clients. This all-in-one solution streamlines your billing process by allowing quick and customized invoice creation with features like auto-fetching and bulk editing of product HSN codes and GST percentages. With GST Suite, users can generate unlimited invoices in PDF format, making it a versatile option for businesses of all sizes. Additionally, the app supports the generation of other essential documents such as packing slips, credit notes, and returns & refunds reports. GST Suite enhances efficiency by automating the sharing of GST invoices with clients via email or messages. Simplify your billing operations and ensure compliance with accurate invoicing using the GST Suite app.

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Generate packing slips

Generate credit notes

Create gst invoices

Bulk edit hsn

Automated invoice sharing

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ARCS Send Invoice for Payment

$4.99 / Month

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easy invoicing for your store Show more

ARCS Send Invoice for Payment is a specialized app designed to streamline unique e-commerce transactions where standard payment at order placement isn't feasible. Recognizing the rising prominence of online transactions across businesses of all sizes, the app provides a seamless solution for store owners on Shopify to create custom orders and send invoices to customers for review and payment. The app features a user-friendly dashboard that highlights key metrics and grants easy access to invoices with just a click. It also allows users to search through the entire invoice list using various displayed details, as well as export the list for broader usage. With the ability to swiftly send invoices in a few clicks, the app integrates a customizable email template editor, giving users the flexibility to tailor communication to their brand’s voice. As a result, ARCS Send Invoice for Payment helps businesses manage their unique invoicing needs more efficiently in the e-commerce landscape.

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Dashboard metrics

Create orders

Send invoices

Invoice search

Export invoices

Email template editing

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Invoice 360 by MyIntegrator

9.1

2 Reviews

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Streamline invoice management and payments with Invoice 360 by MyIntegrator. Show more

Invoice 360 by MyIntegrator is a powerful tool designed to revolutionize how businesses handle invoicing and payments. With its intuitive B2B Payment Portal, users can effortlessly manage their financial transactions online. The app offers features like automatic payment recording, and flexible 'Pay Now' or 'Pay Later' options that cater to varying business needs. Customers can enjoy a seamless experience as they view and settle invoices promptly, significantly reducing the occurrence of late payments. This streamlining of transactions enhances cash flow, providing companies with a more efficient financial operation. Experience the future of hassle-free business transactions with this innovative app. Download Invoice 360 by MyIntegrator today and transform your business payment process.

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Erp integration

Invoice management

Payment portal

Automatic payment recording

B2b invoicing

View and settle

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MS Order Invoice Generator

9.1

34 Reviews

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Generate, customize, and print professional PDF invoices effortlessly. Show more

MS PDF Order Invoice Generator is a versatile app designed to streamline the creation, printing, and downloading of professional PDF documents for your business needs. With this app, managing invoices, packing slips, and refunds is made simple and efficient, whether you handle them individually or in bulk. It offers a wide selection of customizable, visually appealing templates that can be adjusted to fit any paper size, ensuring your documents reflect your brand's style. The app supports multiple languages and currencies, making it ideal for globally-focused businesses. Additionally, it integrates seamlessly with Shopify, allowing you to print and download documents directly from the app or your Shopify admin panel. Automated email functionality ensures your customers receive their documents efficiently, complete with attached PDF files. If you have specific needs, the responsive customer support team is ready to provide personalized solutions.

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Multi-language support

Multi-currency support

Bulk printing

Customize templates

Generate pdf invoices

Download documents

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WebCEO E‑Invoice Malaysia

$15 / Month

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Streamlines Shopify orders with Malaysia's LHDN e-invoice compliance.

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Entriwise

$55-$199 / Month

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Integrate QuickBooks Online, QuickBooks Desktop, and NetSuite Show more

Entriwise is a cloud-based solution designed to seamlessly integrate Shopify with QuickBooks Online, QuickBooks Desktop Enterprise, and NetSuite, streamlining the financial management for eCommerce businesses. It efficiently processes all types of Shopify transactions, ensuring they are accurately reflected in QuickBooks and NetSuite as appropriate documents. With fully automated accounting and reconciliation features for Shopify Payments, Entriwise simplifies financial operations. The app also manages customer deposits, orders, and invoices for transactions paid through other methods, updating these records upon order shipment. Entriwise enhances inventory management with advanced mapping capabilities, offering inventory quantity synchronization from NetSuite. It provides real-time order flow integration to NetSuite, promoting smooth and consistent data handling across platforms.

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Order management

Inventory sync

Automated accounting

Reconciliation reports

Transaction handling

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OwlPay ‑ Manage Order & Vendor

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Sync order with one click Show more

OwlPay is a comprehensive app designed to simplify order and vendor management, especially for businesses working with international vendors, artists, and influencers. It offers a seamless experience for managing orders on a multilingual platform, eliminating the need for manual order splitting by suppliers. OwlPay features a clean and intuitive dashboard that allows users to easily visualize sales data, making it an invaluable tool for crafting effective business strategies. The app enables effortless import and export of orders between Shopify and OwlPay with just one click, ensuring smooth integration and management of ecommerce operations. Additionally, it assists in reconciling and reviewing account payables across departments and with vendors, offering a unified platform to manage your entire sales workflow. With OwlPay's innovative technology, businesses can not only streamline their operations but also fuel their growth effectively.

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Multi-language support

Order synchronization

Import orders

Split orders

Export orders

Vendor management

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QuickBooks Sync by Amaka

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Automate QuickBooks syncing for seamless sales, payments, and reconciliation. Show more

QuickBooks Sync by Amaka is a powerful integration tool designed to seamlessly connect your transactions to QuickBooks Online, ensuring efficient financial management. It offers the convenience of syncing sales, payments, fees, taxes, and other transaction types to either a daily summarized invoice or individual invoices. By automatically matching transactions to the bank feed, this app simplifies the reconciliation process, saving you valuable time. You can also back-sync up to 12 months of historical data, allowing for comprehensive record-keeping. With multiple configuration options, users can choose the 2-Minute Express setup for default account mapping or opt for an advanced setup for custom mapping. Amaka's team of Integration Specialists is available 24/7, providing unlimited support through video calls, live chat, or help desk, ensuring a smooth and hassle-free setup experience. Start with a 100% free plan or explore more features with a 7-day premium free-trial, and eliminate the risk of missed orders or duplicates while significantly reducing manual data entry efforts.

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Automated syncing

Historical data sync

Daily invoices

Transaction matching

Custom mapping

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Xero Sync by Amaka

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Xero Sync by Amaka: Automate transactions, fast-track reconciliation, save hours monthly. Show more

Xero Sync by Amaka is an efficient app designed to streamline the integration of sales, payments, fees, and taxes, directly into your Xero accounting software. It offers flexibility by allowing users to choose between daily summarized invoices or individual invoices for each transaction. With its seamless automatic matching to the bank feed, the app significantly speeds up the reconciliation process, saving users valuable time on manual data entry. The app supports back syncing, with up to 12 months of historical data, and offers a 100% free plan or a 7-day premium free trial for new users. Setup options range from a quick 2-Minute Express setup with default mapping to an Advanced setup for custom mapping needs. Furthermore, Amaka’s Integration Specialists provide round-the-clock support and guidance to ensure an optimal setup, making never missing orders or dealing with duplicates a thing of the past.

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Automate transactions

Fast-track reconciliation

Daily summarized invoices

Custom mapping options

Back sync data

Default account creation

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XERO SYNC Orders and Inventory

$19.99-$59.99 / Month

9.1

165 Reviews

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Easiest & automated XERO sync & export for reconciliation Show more

XERO SYNC by BOLD is an essential tool for Shopify users seeking seamless integration with Xero, making bookkeeping a breeze. This app ensures that all your Shopify orders are effortlessly synced to Xero, including line items, shipping, and taxes, providing a comprehensive view of your sales data. If you're using Shopify Payments, you'll appreciate the automatic recording of refunds, discounts, and payment fees as separate entries, enhancing financial clarity. With options for scheduled syncing or on-demand access, your data is always at your fingertips, supporting real-time financial decision-making. XERO SYNC also allows for the importation of customer details with each order, streamlining customer data management. The app’s global tax support and ability to sync sales, products, shipping, and more to Xero simplifies tax compliance across borders. Backed by a dedicated support team and extensive documentation, users can confidently integrate and manage their Shopify and Xero accounts.

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Refund processing

Automated syncing

Customer import

Shipping sync

Order line item inclusion

Tax integration

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Shopify Invoice reconciliation apps

Related Categories

Price

Based on reviews

Showing 1 to 20 of 1 Apps

NetWise: Wholesale & B2B

Cointab Reconciliation System

Finance Connect

Dashi MYOB Accounting Sync

Amaka

Mantis

Order Printer ‑ Pdf Invoice EG

GST Invoice Generator: Refrens

F: PDF Invoice Generator

Taiwan Invoice

GST Suite

ARCS Send Invoice for Payment

Invoice 360 by MyIntegrator

MS Order Invoice Generator

WebCEO E‑Invoice Malaysia

Entriwise

OwlPay ‑ Manage Order & Vendor

QuickBooks Sync by Amaka

Xero Sync by Amaka

XERO SYNC Orders and Inventory